Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.23□□□□□ -1.41
PDX1P52945 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 AC036111.2-201ENST00000533247 901 ntBASIC6.23□□□□□ -1.41
PDX1P52945 TRAV11-201ENST00000539512 339 ntBASIC6.23□□□□□ -1.41
PDX1P52945 CYCSP38-201ENST00000559840 322 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.23□□□□□ -1.41
PDX1P52945 AL953862.2-201ENST00000603089 820 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AC073046.2-201ENST00000604756 527 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AL080312.2-201ENST00000613001 630 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AL445647.2-201ENST00000615170 130 ntBASIC6.23□□□□□ -1.41
PDX1P52945 MIR6729-201ENST00000618194 65 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDX1P52945 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDX1P52945 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.23□□□□□ -1.41
PDX1P52945 AC112243.1-201ENST00000623949 3851 ntBASIC6.23□□□□□ -1.41
PDX1P52945 CDY10P-201ENST00000452415 1567 ntBASIC6.23□□□□□ -1.41
PDX1P52945 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDX1P52945 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.22□□□□□ -1.41
PDX1P52945 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.22□□□□□ -1.41
PDX1P52945 MTCO1P25-201ENST00000414449 1799 ntBASIC6.22□□□□□ -1.41
PDX1P52945 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 AC005522.1-201ENST00000395416 346 ntBASIC6.22□□□□□ -1.41
PDX1P52945 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.22□□□□□ -1.41
PDX1P52945 AC094019.1-201ENST00000434678 472 ntBASIC6.22□□□□□ -1.41
PDX1P52945 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.22□□□□□ -1.41
PDX1P52945 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 AC018638.3-201ENST00000461273 132 ntBASIC6.22□□□□□ -1.41
PDX1P52945 RN7SL221P-201ENST00000466190 281 ntBASIC6.22□□□□□ -1.41
PDX1P52945 RPL23AP64-201ENST00000469465 435 ntBASIC6.22□□□□□ -1.41
PDX1P52945 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 OR7E99P-201ENST00000505750 922 ntBASIC6.22□□□□□ -1.41
PDX1P52945 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDX1P52945 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.22□□□□□ -1.41
PDX1P52945 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.22□□□□□ -1.41
PDX1P52945 NANOGNBP2-201ENST00000544753 553 ntBASIC6.22□□□□□ -1.41
PDX1P52945 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.22□□□□□ -1.41
PDX1P52945 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.22□□□□□ -1.41
PDX1P52945 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.22□□□□□ -1.41
PDX1P52945 TNPO1P2-201ENST00000426249 2665 ntBASIC6.22□□□□□ -1.41
PDX1P52945 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDX1P52945 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDX1P52945 AC074141.1-201ENST00000588129 2995 ntBASIC6.21□□□□□ -1.41
PDX1P52945 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PDX1P52945 AC009135.2-201ENST00000624136 1768 ntBASIC6.21□□□□□ -1.41
PDX1P52945 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDX1P52945 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PDX1P52945 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 AC013488.1-201ENST00000526618 1838 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.21□□□□□ -1.42
PDX1P52945 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PDX1P52945 COX6B1P3-201ENST00000312310 260 ntBASIC6.21□□□□□ -1.42
PDX1P52945 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PDX1P52945 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PDX1P52945 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PDX1P52945 AC004386.1-201ENST00000393214 761 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 MED28P4-201ENST00000433137 572 ntBASIC6.21□□□□□ -1.42
PDX1P52945 EMC3-AS1-205ENST00000438698 534 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 AL139156.3-201ENST00000454802 394 ntBASIC6.21□□□□□ -1.42
PDX1P52945 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDX1P52945 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.21□□□□□ -1.42
PDX1P52945 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.21□□□□□ -1.42
PDX1P52945 COX6B1P4-201ENST00000519826 484 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 334.1 ms