Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
USP11P51784 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.92□□□□□ -1.14
USP11P51784 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 AC241584.2-201ENST00000637142 2090 ntBASIC7.92□□□□□ -1.14
USP11P51784 RNA5SP429-201ENST00000363688 109 ntBASIC7.92□□□□□ -1.14
USP11P51784 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
USP11P51784 OR7E156P-201ENST00000400303 464 ntBASIC7.92□□□□□ -1.14
USP11P51784 AL132875.1-201ENST00000403623 949 ntBASIC7.92□□□□□ -1.14
USP11P51784 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.92□□□□□ -1.14
USP11P51784 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 NMNAT1P2-201ENST00000435192 860 ntBASIC7.92□□□□□ -1.14
USP11P51784 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 HSFY3P-201ENST00000444242 1191 ntBASIC7.92□□□□□ -1.14
USP11P51784 AL356133.1-201ENST00000444762 372 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 TREML3P-201ENST00000457327 501 ntBASIC7.92□□□□□ -1.14
USP11P51784 CABYRP1-201ENST00000465493 1045 ntBASIC7.92□□□□□ -1.14
USP11P51784 RPS14P8-201ENST00000478778 369 ntBASIC7.92□□□□□ -1.14
USP11P51784 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.92□□□□□ -1.14
USP11P51784 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 RN7SL868P-201ENST00000485915 303 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC134050.1-201ENST00000495088 933 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC108475.1-201ENST00000507880 950 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 ASNSP4-201ENST00000511103 447 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 EEF1B2P2-201ENST00000519625 676 ntBASIC7.92□□□□□ -1.14
USP11P51784 CARSP2-201ENST00000520688 277 ntBASIC7.92□□□□□ -1.14
USP11P51784 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC7.92□□□□□ -1.14
USP11P51784 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.92□□□□□ -1.14
USP11P51784 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.92□□□□□ -1.14
USP11P51784 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.92□□□□□ -1.14
USP11P51784 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 AL356801.1-201ENST00000559320 294 ntBASIC7.92□□□□□ -1.14
USP11P51784 MRPS21P9-201ENST00000571150 257 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.92□□□□□ -1.14
USP11P51784 MIR4428-201ENST00000584884 73 ntBASIC7.92□□□□□ -1.14
USP11P51784 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.92□□□□□ -1.14
USP11P51784 RPS27AP19-201ENST00000597285 458 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC026741.1-201ENST00000605892 482 ntBASIC7.92□□□□□ -1.14
USP11P51784 AC096586.2-201ENST00000610260 441 ntBASIC7.92□□□□□ -1.14
USP11P51784 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC7.92□□□□□ -1.14
USP11P51784 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.92□□□□□ -1.14
USP11P51784 AC140479.4-205ENST00000636339 820 ntBASIC7.92□□□□□ -1.14
USP11P51784 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.92□□□□□ -1.14
USP11P51784 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.92□□□□□ -1.14
USP11P51784 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 SALL4P7-201ENST00000555779 3120 ntBASIC7.92□□□□□ -1.14
USP11P51784 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.92□□□□□ -1.14
USP11P51784 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 SPATA31C2-201ENST00000324915 3777 ntBASIC7.92□□□□□ -1.14
USP11P51784 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
USP11P51784 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
USP11P51784 AP002800.1-201ENST00000624982 2225 ntBASIC7.91□□□□□ -1.14
USP11P51784 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
USP11P51784 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
USP11P51784 AC123769.2-201ENST00000624332 5984 ntBASIC7.91□□□□□ -1.14
USP11P51784 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 Y_RNA.51-201ENST00000362725 102 ntBASIC7.91□□□□□ -1.14
USP11P51784 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
USP11P51784 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
USP11P51784 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.91□□□□□ -1.14
USP11P51784 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.91□□□□□ -1.14
USP11P51784 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.91□□□□□ -1.14
USP11P51784 AL356320.2-201ENST00000417263 507 ntBASIC7.91□□□□□ -1.14
USP11P51784 VN1R31P-201ENST00000417498 730 ntBASIC7.91□□□□□ -1.14
USP11P51784 TRGV6-201ENST00000417928 299 ntBASIC7.91□□□□□ -1.14
USP11P51784 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.91□□□□□ -1.14
USP11P51784 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 MORF4L1P5-201ENST00000433352 961 ntBASIC7.91□□□□□ -1.14
USP11P51784 CHCHD4P5-201ENST00000436684 427 ntBASIC7.91□□□□□ -1.14
USP11P51784 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
USP11P51784 AC135721.2-201ENST00000464237 300 ntBASIC7.91□□□□□ -1.14
USP11P51784 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 AC018639.1-201ENST00000492994 442 ntBASIC7.91□□□□□ -1.14
USP11P51784 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.91□□□□□ -1.14
USP11P51784 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms