Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.01
CPS1P31327 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.72□□□□□ -1.01
CPS1P31327 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 AC105114.1-201ENST00000624795 1862 ntBASIC8.72□□□□□ -1.01
CPS1P31327 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 HIGD1AP14-201ENST00000507617 282 ntBASIC8.72□□□□□ -1.01
CPS1P31327 OR51K1P-201ENST00000510214 950 ntBASIC8.72□□□□□ -1.01
CPS1P31327 OR51A1P-201ENST00000511110 946 ntBASIC8.72□□□□□ -1.01
CPS1P31327 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.72□□□□□ -1.01
CPS1P31327 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 AC023421.1-201ENST00000590535 1785 ntBASIC8.72□□□□□ -1.01
CPS1P31327 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.72□□□□□ -1.01
CPS1P31327 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 AL161901.1-201ENST00000624954 3425 ntBASIC8.72□□□□□ -1.01
CPS1P31327 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CPS1P31327 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
CPS1P31327 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
CPS1P31327 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
CPS1P31327 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.71□□□□□ -1.01
CPS1P31327 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 SNORA43.1-201ENST00000364863 140 ntBASIC8.71□□□□□ -1.01
CPS1P31327 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 AL807761.1-201ENST00000417622 171 ntBASIC8.71□□□□□ -1.01
CPS1P31327 AL139148.1-201ENST00000427122 680 ntBASIC8.71□□□□□ -1.01
CPS1P31327 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC8.71□□□□□ -1.01
CPS1P31327 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.71□□□□□ -1.01
CPS1P31327 AC092824.1-201ENST00000483524 576 ntBASIC8.71□□□□□ -1.01
CPS1P31327 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.71□□□□□ -1.01
CPS1P31327 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.71□□□□□ -1.01
CPS1P31327 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 Y_RNA.710-201ENST00000516975 110 ntBASIC8.71□□□□□ -1.01
CPS1P31327 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.71□□□□□ -1.01
CPS1P31327 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.71□□□□□ -1.01
CPS1P31327 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.71□□□□□ -1.01
CPS1P31327 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.71□□□□□ -1.01
CPS1P31327 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 AC015818.6-201ENST00000584274 634 ntBASIC8.71□□□□□ -1.01
CPS1P31327 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.71□□□□□ -1.01
CPS1P31327 AL445222.1-201ENST00000607259 628 ntBASIC8.71□□□□□ -1.01
CPS1P31327 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.71□□□□□ -1.01
CPS1P31327 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.71□□□□□ -1.01
CPS1P31327 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.71□□□□□ -1.01
CPS1P31327 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
CPS1P31327 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.71□□□□□ -1.02
CPS1P31327 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.71□□□□□ -1.02
CPS1P31327 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 LINC02019-201ENST00000608605 2060 ntBASIC8.71□□□□□ -1.02
CPS1P31327 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.71□□□□□ -1.02
CPS1P31327 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.71□□□□□ -1.02
CPS1P31327 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CPS1P31327 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CPS1P31327 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.7□□□□□ -1.02
CPS1P31327 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 EEF1B2P5-201ENST00000444820 548 ntBASIC8.7□□□□□ -1.02
CPS1P31327 ZNF619P1-201ENST00000446539 752 ntBASIC8.7□□□□□ -1.02
CPS1P31327 AL606490.1-201ENST00000452266 765 ntBASIC8.7□□□□□ -1.02
CPS1P31327 RN7SL30P-201ENST00000488416 306 ntBASIC8.7□□□□□ -1.02
CPS1P31327 PCNAP4-201ENST00000532690 730 ntBASIC8.7□□□□□ -1.02
CPS1P31327 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.7□□□□□ -1.02
CPS1P31327 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CPS1P31327 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC8.7□□□□□ -1.02
CPS1P31327 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CPS1P31327 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.7□□□□□ -1.02
CPS1P31327 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 AL592429.1-201ENST00000403909 1473 ntBASIC8.7□□□□□ -1.02
CPS1P31327 AF131215.2-201ENST00000531549 1710 ntBASIC8.7□□□□□ -1.02
CPS1P31327 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CPS1P31327 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms