Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC009166.2-201ENST00000624410 2833 ntBASIC7.71□□□□□ -1.18
TM4SF1P30408 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TM4SF1P30408 GUCY1B2-204ENST00000531898 1979 ntBASIC7.71□□□□□ -1.18
TM4SF1P30408 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.71□□□□□ -1.18
TM4SF1P30408 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TM4SF1P30408 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TM4SF1P30408 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
TM4SF1P30408 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
TM4SF1P30408 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TM4SF1P30408 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.71□□□□□ -1.18
TM4SF1P30408 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC078880.4-201ENST00000617627 1749 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 MAPK10-287ENST00000641217 3037 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 RN7SKP162-201ENST00000363605 345 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.7□□□□□ -1.18
TM4SF1P30408 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC007394.1-201ENST00000421941 531 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 VDAC1P2-201ENST00000423609 850 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC002504.1-201ENST00000438281 691 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 NPM1P27-201ENST00000502784 830 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC006924.1-201ENST00000610750 559 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TM4SF1P30408 MARK2P4-201ENST00000503381 2380 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.7□□□□□ -1.18
TM4SF1P30408 GNL2P1-201ENST00000451274 2190 ntBASIC7.7□□□□□ -1.18
TM4SF1P30408 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.7□□□□□ -1.18
TM4SF1P30408 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.69□□□□□ -1.18
TM4SF1P30408 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
TM4SF1P30408 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 SNORA43.1-201ENST00000364863 140 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 RPL34P3-201ENST00000421454 338 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AL355433.1-201ENST00000422804 300 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 VN1R38P-201ENST00000450265 887 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 RN7SL466P-201ENST00000497546 295 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AP000662.1-201ENST00000530952 487 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC006530.1-201ENST00000555980 571 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AC009120.3-201ENST00000563335 499 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC105036.1-201ENST00000566222 271 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AC015818.6-201ENST00000584274 634 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 SUMO2P15-201ENST00000604285 278 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 AC211433.2-201ENST00000608433 387 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.69□□□□□ -1.18
TM4SF1P30408 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 AC123912.3-201ENST00000600907 1367 ntBASIC7.69□□□□□ -1.18
TM4SF1P30408 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
TM4SF1P30408 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
TM4SF1P30408 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms