Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
COL8A1P27658 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC7.17□□□□□ -1.26
COL8A1P27658 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.17□□□□□ -1.26
COL8A1P27658 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 LINC02035-201ENST00000610128 5476 ntBASIC7.17□□□□□ -1.26
COL8A1P27658 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
COL8A1P27658 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC7.17□□□□□ -1.26
COL8A1P27658 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 MTND4P1-201ENST00000457501 1466 ntBASIC7.17□□□□□ -1.26
COL8A1P27658 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 ABCA17P-204ENST00000494925 3478 ntBASIC7.17□□□□□ -1.26
COL8A1P27658 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL8A1P27658 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC7.17□□□□□ -1.26
COL8A1P27658 PSG10P-201ENST00000501199 1500 ntBASIC7.17□□□□□ -1.26
COL8A1P27658 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
COL8A1P27658 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
COL8A1P27658 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 AL445933.1-201ENST00000434240 2242 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC116456.2-201ENST00000623018 2209 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
COL8A1P27658 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 RN7SKP173-201ENST00000362821 315 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 Y_RNA.89-201ENST00000363031 102 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 NCSTNP1-201ENST00000406229 144 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AL050321.1-201ENST00000432363 400 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AL606490.7-201ENST00000433136 191 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 PHB2P1-201ENST00000434943 890 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 MTCYBP45-201ENST00000435243 565 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC245517.2-201ENST00000442890 346 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 RPS27P5-201ENST00000444247 244 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 SLAMF6P1-201ENST00000451067 602 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC7.16□□□□□ -1.26
COL8A1P27658 SUMO1P2-201ENST00000452524 304 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC022730.1-201ENST00000473114 568 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC072039.1-201ENST00000477611 581 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 RPL7P24-201ENST00000493052 752 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 RN7SL653P-201ENST00000494134 293 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 AF235103.2-201ENST00000525753 346 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 HMGN1P26-201ENST00000558737 303 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC034268.2-201ENST00000571784 482 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 MIR4503-201ENST00000582187 83 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC087393.3-201ENST00000584971 166 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC060766.2-201ENST00000588235 334 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AP001267.4-201ENST00000602598 545 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC7.16□□□□□ -1.26
COL8A1P27658 AC019193.3-201ENST00000609144 554 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AL592148.2-201ENST00000612210 372 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 RN7SL301P-202ENST00000618767 298 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.16□□□□□ -1.26
COL8A1P27658 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC7.16□□□□□ -1.26
COL8A1P27658 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AC097375.3-201ENST00000515329 2652 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AC007126.1-201ENST00000508202 4781 ntBASIC7.16□□□□□ -1.26
COL8A1P27658 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL8A1P27658 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms