Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.98□□□□□ -1.45
COL5A1P20908 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL5A1P20908 GNL2P1-201ENST00000451274 2190 ntBASIC5.98□□□□□ -1.45
COL5A1P20908 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC5.98□□□□□ -1.45
COL5A1P20908 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL132875.1-201ENST00000403623 949 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC097467.4-201ENST00000605504 141 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC116667.2-201ENST00000641075 823 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 AC112243.1-201ENST00000623949 3851 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 AP003119.3-201ENST00000566747 4192 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 HLF-210ENST00000575345 3589 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC012254.3-201ENST00000591183 2117 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 PARP4P1-201ENST00000435945 2337 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 AC011369.2-201ENST00000624423 1567 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AL050335.1-201ENST00000396909 869 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 OR7E101P-201ENST00000400428 513 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 RPL34P3-201ENST00000421454 338 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AL627308.1-201ENST00000435693 821 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 SUMO2P3-201ENST00000438311 288 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 MORF4L1P4-201ENST00000450245 976 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 RPS27AP2-201ENST00000457576 465 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 ATP5LP3-201ENST00000514223 304 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 IGHV1-14-201ENST00000523391 241 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC091078.2-201ENST00000557145 559 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.97□□□□□ -1.45
COL5A1P20908 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.97□□□□□ -1.45
COL5A1P20908 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 AL136131.3-201ENST00000607600 188 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 AC022106.1-201ENST00000612834 766 ntBASIC5.97□□□□□ -1.45
COL5A1P20908 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.97□□□□□ -1.45
COL5A1P20908 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
COL5A1P20908 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL5A1P20908 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.45
COL5A1P20908 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
COL5A1P20908 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
COL5A1P20908 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.96□□□□□ -1.45
COL5A1P20908 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.96□□□□□ -1.45
COL5A1P20908 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.96□□□□□ -1.45
COL5A1P20908 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
COL5A1P20908 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 AC110597.1-201ENST00000562669 3176 ntBASIC5.96□□□□□ -1.46
COL5A1P20908 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
COL5A1P20908 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL5A1P20908 MROH3P-201ENST00000435735 2676 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms