Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL136295.6-201ENST00000610486 658 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AC010975.3-201ENST00000618727 978 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 AL157359.3-201ENST00000623771 217 ntBASIC7.73□□□□□ -1.17
SOX1O00570 AC010608.2-201ENST00000624830 470 ntBASIC7.73□□□□□ -1.17
SOX1O00570 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 OR7E25P-202ENST00000641088 5937 ntBASIC7.73□□□□□ -1.17
SOX1O00570 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
SOX1O00570 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.73□□□□□ -1.17
SOX1O00570 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SOX1O00570 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
SOX1O00570 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 AC006116.1-201ENST00000587908 2171 ntBASIC7.73□□□□□ -1.17
SOX1O00570 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SOX1O00570 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AC010132.4-201ENST00000569883 1368 ntBASIC7.72□□□□□ -1.17
SOX1O00570 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 AL158206.1-201ENST00000563205 1965 ntBASIC7.72□□□□□ -1.17
SOX1O00570 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SOX1O00570 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 RNU5B-1-201ENST00000363286 116 ntBASIC7.72□□□□□ -1.17
SOX1O00570 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SOX1O00570 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 YWHAZP6-201ENST00000399764 738 ntBASIC7.72□□□□□ -1.17
SOX1O00570 MTND4LP21-201ENST00000415303 295 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AC008173.1-201ENST00000418901 264 ntBASIC7.72□□□□□ -1.17
SOX1O00570 EEF1GP7-201ENST00000422983 703 ntBASIC7.72□□□□□ -1.17
SOX1O00570 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 AC092393.1-201ENST00000439625 742 ntBASIC7.72□□□□□ -1.17
SOX1O00570 MTND5P2-201ENST00000442927 1142 ntBASIC7.72□□□□□ -1.17
SOX1O00570 SS18L2P1-201ENST00000445923 213 ntBASIC7.72□□□□□ -1.17
SOX1O00570 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 RN7SL160P-201ENST00000468558 284 ntBASIC7.72□□□□□ -1.17
SOX1O00570 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 AC020937.1-201ENST00000519677 1013 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.72□□□□□ -1.17
SOX1O00570 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.72□□□□□ -1.17
SOX1O00570 AC090695.1-201ENST00000561269 1222 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AC090826.1-203ENST00000569235 490 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 AL031985.2-201ENST00000600955 480 ntBASIC7.72□□□□□ -1.17
SOX1O00570 MTCO3P22-201ENST00000603219 784 ntBASIC7.72□□□□□ -1.17
SOX1O00570 DUXAP11-201ENST00000603858 526 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AL031775.1-201ENST00000607014 887 ntBASIC7.72□□□□□ -1.17
SOX1O00570 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 AL138478.1-201ENST00000612252 832 ntBASIC7.72□□□□□ -1.17
SOX1O00570 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.72□□□□□ -1.17
SOX1O00570 AC079248.2-201ENST00000623779 326 ntBASIC7.72□□□□□ -1.17
SOX1O00570 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
SOX1O00570 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
SOX1O00570 AC092451.3-201ENST00000625067 1343 ntBASIC7.72□□□□□ -1.17
SOX1O00570 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.72□□□□□ -1.17
SOX1O00570 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SOX1O00570 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SOX1O00570 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms