Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 uc_338.31-201ENST00000615595 186 ntBASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 AC022960.2-201ENST00000616300 666 ntBASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 MIR6085-201ENST00000618314 110 ntBASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 MTND5P12-201ENST00000502851 1449 ntBASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.56□□□□□ -1.36
RAI2Q9Y5P3 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 RPL12P12-201ENST00000424633 501 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC083862.1-201ENST00000427378 1242 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 GAPDHP59-201ENST00000435908 267 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 GTF2IP14-201ENST00000441415 586 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 Z83838.1-202ENST00000456225 839 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC092824.1-201ENST00000483524 576 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC018645.1-201ENST00000505003 109 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC091874.2-201ENST00000505889 720 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 AC010325.3-201ENST00000641084 394 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 BRD7P6-201ENST00000431406 1860 ntBASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RAI2Q9Y5P3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC241584.2-201ENST00000637142 2090 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 SAGE3P-201ENST00000619800 1635 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AL050335.1-201ENST00000396909 869 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 RBBP4P5-201ENST00000398583 1266 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 GCNT1P4-201ENST00000404096 329 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 RN7SKP129-201ENST00000410288 299 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 BMS1P13-201ENST00000417301 885 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 GPN3P1-201ENST00000423883 535 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 BMS1P10-201ENST00000443754 1120 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 NPM1P27-201ENST00000502784 830 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC091965.3-201ENST00000506236 208 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC096754.1-201ENST00000508904 818 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 RPL41P2-201ENST00000544920 409 ntBASIC6.54□□□□□ -1.36
RAI2Q9Y5P3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms