Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS29Q9UBQ0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AL355377.1-201ENST00000621125 1653 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AL451142.1-201ENST00000375867 775 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 DHFRP2-201ENST00000414224 547 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 GAPDHP19-201ENST00000431768 1005 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 OR2L9P-201ENST00000444456 913 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 POU5F1P5-201ENST00000445059 658 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 RN7SL393P-201ENST00000463588 296 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 RNA5SP116-201ENST00000516132 98 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 CYCSP25-201ENST00000525280 316 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC135983.3-201ENST00000528049 1226 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 OR6M2P-201ENST00000529831 871 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 TDGP1-201ENST00000543961 1229 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 MIR212-201ENST00000586026 110 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AP003789.1-201ENST00000617737 605 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AC211486.4-201ENST00000621495 113 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 AL359091.1-201ENST00000449048 1734 ntBASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS29Q9UBQ0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC092724.1-201ENST00000624623 3397 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC005225.5-201ENST00000623547 2225 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC003045.1-201ENST00000398779 713 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 RPS7P14-201ENST00000426405 583 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL022324.2-201ENST00000434827 780 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 SOCS5P1-201ENST00000440415 949 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 COX4I1P2-201ENST00000447446 547 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 RN7SL39P-201ENST00000462264 297 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL355032.1-201ENST00000472981 438 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC139792.1-201ENST00000607051 647 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 AC010998.3-201ENST00000613871 631 ntBASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS29Q9UBQ0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms