Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC004014.2-201ENST00000623718 5122 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC061975.5-201ENST00000584928 1441 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AL359715.1-201ENST00000404330 555 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AL355615.1-201ENST00000406187 641 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 SLC20A1P1-201ENST00000413906 956 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 RPS24P7-201ENST00000416921 246 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 RNF19BPX-201ENST00000426224 625 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 BRWD1P3-201ENST00000428816 390 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 NPM1P19-201ENST00000450070 712 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 PPP1R2P6-201ENST00000478565 588 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 RN7SL568P-201ENST00000493069 298 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC093878.1-201ENST00000515630 432 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 Vault.2-201ENST00000516519 98 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 MIR378C-201ENST00000578683 81 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 RPL7AP69-201ENST00000595306 806 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AL353778.1-201ENST00000603149 408 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AC063962.1-201ENST00000608199 521 ntBASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.01□□□□□ -1.13
SYNGAP1Q96PV0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AL359922.2-201ENST00000581788 3017 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC099786.3-201ENST00000565735 1410 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 RN7SKP250-201ENST00000363924 321 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 RN7SKP189-201ENST00000365042 330 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 Z68694.1-201ENST00000413929 841 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 TRGV6-201ENST00000417928 299 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 SEPT2P1-201ENST00000419651 180 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC234781.2-201ENST00000426370 994 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 GAPDHP75-201ENST00000433910 943 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 MED6P1-201ENST00000439659 713 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AL031681.1-201ENST00000443304 400 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 RPS18P1-201ENST00000447840 458 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC099670.1-201ENST00000455141 783 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 SYT14P1-201ENST00000481459 721 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 HMGB1P38-201ENST00000490557 577 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC107401.1-201ENST00000503426 685 ntBASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8□□□□□ -1.13
SYNGAP1Q96PV0 B3GNTL1P1-201ENST00000509174 289 ntBASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms