Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC119674.1-213ENST00000641177 1386 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AC011815.2-201ENST00000618230 2021 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 AL353743.3-201ENST00000442109 1468 ntBASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ZNF439Q8NDP4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RNU1-84P-201ENST00000365447 164 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RN7SKP161-201ENST00000411110 305 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RNA5SP115-201ENST00000411160 107 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 MRPS21P5-201ENST00000417885 231 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC234771.4-201ENST00000441416 730 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 GAPDHP37-201ENST00000442317 968 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 DNAJC19P5-201ENST00000443295 316 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC022730.1-201ENST00000473114 568 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RN7SL165P-201ENST00000477476 291 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC018639.1-201ENST00000492994 442 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC018645.1-201ENST00000505003 109 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC093325.1-201ENST00000508378 326 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RN7SKP67-201ENST00000515905 235 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 COX6B1P4-201ENST00000519826 484 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC084851.2-201ENST00000530377 364 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 OR9G2P-201ENST00000533326 880 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RPL3P13-201ENST00000550415 216 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AL591222.2-201ENST00000604443 754 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC024589.2-201ENST00000605642 1294 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 U91328.4-201ENST00000608919 517 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 LINC02495-203ENST00000636704 242 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC005225.5-201ENST00000623547 2225 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 AC011369.2-201ENST00000624423 1567 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 LINC01616-201ENST00000561816 2280 ntBASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.25□□□□□ -1.57
ZNF439Q8NDP4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 BIN2P1-201ENST00000504996 1530 ntBASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 SNORD35A-201ENST00000363389 86 ntBASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.24□□□□□ -1.57
ZNF439Q8NDP4 ARSFP1-201ENST00000398758 477 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms