Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.91□□□□□ -1.3
YBX1P67809 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
YBX1P67809 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
YBX1P67809 THAP12P8-201ENST00000447914 2115 ntBASIC6.91□□□□□ -1.3
YBX1P67809 AL121949.2-201ENST00000403446 1548 ntBASIC6.91□□□□□ -1.3
YBX1P67809 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
YBX1P67809 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
YBX1P67809 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.9□□□□□ -1.3
YBX1P67809 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 AL353898.3-201ENST00000624679 1755 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 MROH3P-201ENST00000435735 2676 ntBASIC6.9□□□□□ -1.3
YBX1P67809 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 U3.14-201ENST00000365363 227 ntBASIC6.9□□□□□ -1.3
YBX1P67809 SNORA70.5-201ENST00000365519 135 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RNU6-468P-201ENST00000384003 109 ntBASIC6.9□□□□□ -1.3
YBX1P67809 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.9□□□□□ -1.3
YBX1P67809 SUMO2P13-201ENST00000403109 272 ntBASIC6.9□□□□□ -1.3
YBX1P67809 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 RN7SKP85-201ENST00000411349 318 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RN7SKP30-201ENST00000411373 334 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AL158050.1-201ENST00000416077 457 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.9□□□□□ -1.3
YBX1P67809 RPL7P55-201ENST00000450522 746 ntBASIC6.9□□□□□ -1.3
YBX1P67809 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 NPM1P13-201ENST00000452663 865 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RPSAP7-201ENST00000456871 885 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RPS3AP43-201ENST00000479743 781 ntBASIC6.9□□□□□ -1.3
YBX1P67809 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.9□□□□□ -1.3
YBX1P67809 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
YBX1P67809 MTCO3P7-201ENST00000510008 774 ntBASIC6.9□□□□□ -1.3
YBX1P67809 HMGB1P47-201ENST00000511281 589 ntBASIC6.9□□□□□ -1.3
YBX1P67809 MRPS33P3-201ENST00000513456 322 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC027801.3-201ENST00000515049 698 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 AC105185.1-201ENST00000518705 535 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC021733.2-201ENST00000518830 497 ntBASIC6.9□□□□□ -1.3
YBX1P67809 MTND4LP18-201ENST00000526864 291 ntBASIC6.9□□□□□ -1.3
YBX1P67809 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.9□□□□□ -1.3
YBX1P67809 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC6.9□□□□□ -1.3
YBX1P67809 OR4A42P-201ENST00000531397 938 ntBASIC6.9□□□□□ -1.3
YBX1P67809 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.9□□□□□ -1.3
YBX1P67809 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.9□□□□□ -1.3
YBX1P67809 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 AC090971.3-201ENST00000557871 1041 ntBASIC6.9□□□□□ -1.3
YBX1P67809 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 RPS7P1-201ENST00000571702 585 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC027796.1-201ENST00000575593 512 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.9□□□□□ -1.3
YBX1P67809 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 Z82195.1-201ENST00000604558 398 ntBASIC6.9□□□□□ -1.3
YBX1P67809 RBM11P1-201ENST00000604951 799 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AL355333.1-201ENST00000605632 279 ntBASIC6.9□□□□□ -1.3
YBX1P67809 OR7M1P-201ENST00000608946 533 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC027271.1-201ENST00000610270 610 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AL356752.1-201ENST00000615844 593 ntBASIC6.9□□□□□ -1.3
YBX1P67809 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.9□□□□□ -1.3
YBX1P67809 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.9□□□□□ -1.3
YBX1P67809 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
YBX1P67809 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.9□□□□□ -1.31
YBX1P67809 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
YBX1P67809 AL031651.1-201ENST00000615357 1438 ntBASIC6.9□□□□□ -1.31
YBX1P67809 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.9□□□□□ -1.31
YBX1P67809 ZNF876P-202ENST00000398732 1485 ntBASIC6.9□□□□□ -1.31
YBX1P67809 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
YBX1P67809 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
YBX1P67809 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.9□□□□□ -1.31
YBX1P67809 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
YBX1P67809 AC007406.5-201ENST00000570140 3170 ntBASIC6.9□□□□□ -1.31
YBX1P67809 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
YBX1P67809 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
YBX1P67809 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.89□□□□□ -1.31
YBX1P67809 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
YBX1P67809 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms