Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC10.83□□□□□ -0.68
SMARCA4P51532 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SMARCA4P51532 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SMARCA4P51532 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SMARCA4P51532 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
SMARCA4P51532 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SMARCA4P51532 RPS7P3-201ENST00000443360 580 ntBASIC10.82□□□□□ -0.68
SMARCA4P51532 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC10.82□□□□□ -0.68
SMARCA4P51532 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC10.82□□□□□ -0.68
SMARCA4P51532 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC10.82□□□□□ -0.68
SMARCA4P51532 MINCR-206ENST00000524335 499 ntTSL 2 BASIC10.82□□□□□ -0.68
SMARCA4P51532 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC10.82□□□□□ -0.68
SMARCA4P51532 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.82□□□□□ -0.68
SMARCA4P51532 AC092944.2-201ENST00000605443 889 ntBASIC10.82□□□□□ -0.68
SMARCA4P51532 SAMMSON-227ENST00000642114 1199 ntBASIC10.82□□□□□ -0.68
SMARCA4P51532 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMARCA4P51532 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC10.82□□□□□ -0.68
SMARCA4P51532 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMARCA4P51532 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SMARCA4P51532 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMARCA4P51532 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SMARCA4P51532 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SMARCA4P51532 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
SMARCA4P51532 AP001541.1-201ENST00000623322 1904 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC10.81□□□□□ -0.68
SMARCA4P51532 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC10.81□□□□□ -0.68
SMARCA4P51532 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 U3.2-201ENST00000362981 210 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 Y_RNA.625-201ENST00000411256 107 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.81□□□□□ -0.68
SMARCA4P51532 RN7SL329P-201ENST00000467740 299 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 RN7SL184P-201ENST00000488308 297 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 NDUFA5P12-201ENST00000503796 343 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 AC093763.2-201ENST00000505334 1223 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 BX510359.5-201ENST00000515651 304 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC10.81□□□□□ -0.68
SMARCA4P51532 AC119403.2-201ENST00000590960 598 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC10.81□□□□□ -0.68
SMARCA4P51532 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC10.81□□□□□ -0.68
SMARCA4P51532 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC10.81□□□□□ -0.68
SMARCA4P51532 AC087269.2-201ENST00000641764 975 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 AC073429.2-201ENST00000569694 1444 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC10.81□□□□□ -0.68
SMARCA4P51532 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 AL080317.3-201ENST00000607434 4315 ntBASIC10.81□□□□□ -0.68
SMARCA4P51532 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SMARCA4P51532 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SMARCA4P51532 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SMARCA4P51532 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SMARCA4P51532 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SMARCA4P51532 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 FTH1P10-202ENST00000430907 550 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 DNAJA1P6-201ENST00000437347 354 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC10.8□□□□□ -0.68
SMARCA4P51532 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC10.8□□□□□ -0.68
SMARCA4P51532 SALL4P7-201ENST00000555779 3120 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.8□□□□□ -0.68
SMARCA4P51532 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC10.8□□□□□ -0.68
SMARCA4P51532 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.8□□□□□ -0.68
SMARCA4P51532 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC10.8□□□□□ -0.68
SMARCA4P51532 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC025470.1-201ENST00000510053 2032 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC092725.2-201ENST00000567658 1389 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC10.8□□□□□ -0.68
SMARCA4P51532 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC10.8□□□□□ -0.68
SMARCA4P51532 LRRC37A14P-201ENST00000452297 462 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 RN7SL610P-201ENST00000463845 291 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 RN7SL547P-201ENST00000490793 290 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 SNORA43.3-201ENST00000517240 103 ntBASIC10.8□□□□□ -0.68
SMARCA4P51532 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SMARCA4P51532 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SMARCA4P51532 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
SMARCA4P51532 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 AC011815.2-201ENST00000618230 2021 ntBASIC10.79□□□□□ -0.68
SMARCA4P51532 CR383656.5-201ENST00000547616 1340 ntBASIC10.79□□□□□ -0.68
SMARCA4P51532 AC092692.1-201ENST00000623625 2595 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms