Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 AC121334.1-201ENST00000396414 802 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AL445238.1-204ENST00000400311 463 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.41□□□□□ -1.38
FDFT1P37268 AC093664.1-201ENST00000511779 289 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.41□□□□□ -1.38
FDFT1P37268 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 RN7SL475P-201ENST00000583379 298 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.41□□□□□ -1.38
FDFT1P37268 AL591222.2-201ENST00000604443 754 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.41□□□□□ -1.38
FDFT1P37268 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.41□□□□□ -1.38
FDFT1P37268 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 MIR6503-201ENST00000622884 86 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AC003992.1-201ENST00000635364 557 ntBASIC6.41□□□□□ -1.38
FDFT1P37268 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
FDFT1P37268 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
FDFT1P37268 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 OFD1P17-201ENST00000437639 3018 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
FDFT1P37268 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
FDFT1P37268 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.4□□□□□ -1.38
FDFT1P37268 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
FDFT1P37268 AL033519.1-201ENST00000407266 307 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 GPN3P1-201ENST00000423883 535 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.4□□□□□ -1.38
FDFT1P37268 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.4□□□□□ -1.38
FDFT1P37268 AL451063.1-201ENST00000450164 1133 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 RANP2-201ENST00000456833 229 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.4□□□□□ -1.38
FDFT1P37268 AC114324.2-202ENST00000503812 134 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 RNA5SP418-201ENST00000515951 117 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.4□□□□□ -1.38
FDFT1P37268 RPL41P2-201ENST00000544920 409 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.4□□□□□ -1.38
FDFT1P37268 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.4□□□□□ -1.38
FDFT1P37268 AC027796.1-201ENST00000575593 512 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 SETP3-201ENST00000581726 813 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AC027229.1-201ENST00000583887 253 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.4□□□□□ -1.38
FDFT1P37268 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AL008582.1-201ENST00000609612 442 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.4□□□□□ -1.38
FDFT1P37268 AC007204.1-201ENST00000621794 555 ntBASIC6.4□□□□□ -1.38
FDFT1P37268 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
FDFT1P37268 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FDFT1P37268 HDAC1P2-201ENST00000453661 1398 ntBASIC6.4□□□□□ -1.39
FDFT1P37268 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.4□□□□□ -1.39
FDFT1P37268 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.39
FDFT1P37268 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
FDFT1P37268 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FDFT1P37268 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
FDFT1P37268 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.4□□□□□ -1.39
FDFT1P37268 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.4□□□□□ -1.39
FDFT1P37268 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.39□□□□□ -1.39
FDFT1P37268 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.39□□□□□ -1.39
FDFT1P37268 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FDFT1P37268 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
FDFT1P37268 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FDFT1P37268 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FDFT1P37268 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.39□□□□□ -1.39
FDFT1P37268 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.39□□□□□ -1.39
FDFT1P37268 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FDFT1P37268 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FDFT1P37268 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FDFT1P37268 SNORD94-201ENST00000386037 137 ntBASIC6.39□□□□□ -1.39
FDFT1P37268 VIM2P-201ENST00000402383 1294 ntBASIC6.39□□□□□ -1.39
FDFT1P37268 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms