Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 YWHAZP4-201ENST00000392459 708 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 RN7SKP38-201ENST00000410782 309 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 RNA5SP115-201ENST00000411160 107 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 Z82198.3-201ENST00000421145 199 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 EMC3-AS1-205ENST00000438698 534 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 KF459542.1-201ENST00000450908 553 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 VPS25P1-201ENST00000455691 508 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 RN7SL369P-201ENST00000477138 299 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC2P18074 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC2P18074 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC024589.2-201ENST00000605642 1294 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC2P18074 MIR6813-201ENST00000621638 56 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 AC022726.2-201ENST00000634673 547 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 AC087269.2-201ENST00000641764 975 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 OR7E91P-202ENST00000642062 1198 ntBASIC6.52□□□□□ -1.37
ERCC2P18074 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC2P18074 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC2P18074 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ERCC2P18074 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC2P18074 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC2P18074 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 LINC01616-201ENST00000561816 2280 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 PRELID1P1-201ENST00000403549 660 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 RN7SKP161-201ENST00000411110 305 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC2P18074 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC2P18074 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC2P18074 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC2P18074 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC2P18074 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.51□□□□□ -1.37
ERCC2P18074 AC117500.1-201ENST00000497352 755 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 RN7SL612P-201ENST00000497704 295 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AC010343.2-201ENST00000510162 224 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AC253576.1-201ENST00000511645 1156 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC2P18074 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC2P18074 CYCSP25-201ENST00000525280 316 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.51□□□□□ -1.37
ERCC2P18074 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC2P18074 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC2P18074 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.51□□□□□ -1.37
ERCC2P18074 NDUFB9P1-201ENST00000604683 510 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AC011891.2-201ENST00000604949 397 ntBASIC6.51□□□□□ -1.37
ERCC2P18074 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.51□□□□□ -1.37
ERCC2P18074 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms