Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NPM1P28-201ENST00000492269 840 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 OR52H2P-201ENST00000514607 902 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC090888.3-201ENST00000558917 509 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC015849.6-201ENST00000605454 474 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC020978.9-201ENST00000624380 1141 ntBASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
SSX2IPQ9Y2D8 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 Z97989.1-201ENST00000531702 2421 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 SNORA70.3-201ENST00000365075 132 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 RN7SKP232-201ENST00000410170 290 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 RN7SKP296-201ENST00000411185 341 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AK3P5-201ENST00000432033 519 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 KATNBL1P2-201ENST00000433311 835 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 GAPDHP33-201ENST00000443168 1013 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC135983.3-201ENST00000528049 1226 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC093524.1-201ENST00000564266 1094 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 ADAD1P2-201ENST00000588476 646 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC245052.7-201ENST00000601161 359 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 HPVC1-201ENST00000629899 1198 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AC111152.1-202ENST00000635848 339 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 DDX43P1-201ENST00000510713 1763 ntBASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SSX2IPQ9Y2D8 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 AP000547.3-204ENST00000588548 2523 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 SNX18P3-202ENST00000565670 1750 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 PSMC1P6-201ENST00000477233 1319 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 SNORD35A-201ENST00000363389 86 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 U3.52-201ENST00000384034 216 ntBASIC7.11□□□□□ -1.27
SSX2IPQ9Y2D8 RBBP4P5-201ENST00000398583 1266 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms