Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHANK2Q9UPX8 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SHANK2Q9UPX8 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SHANK2Q9UPX8 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 RNA5SP514-201ENST00000363717 111 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 DPPA2P3-201ENST00000411853 655 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AL512637.1-201ENST00000439523 1231 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 RPS27AP3-201ENST00000453803 454 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SETP21-201ENST00000514799 892 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 CTAGE11P-201ENST00000451540 2353 ntBASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SHANK2Q9UPX8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 RN7SKP162-201ENST00000363605 345 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC009237.1-201ENST00000442127 744 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC016027.4-201ENST00000450866 277 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 ACA64.1-201ENST00000459171 127 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 SUMO2P15-201ENST00000604285 278 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CTNNA1P1-201ENST00000515849 2728 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 Z83820.1-201ENST00000456978 1499 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 HDAC1P2-201ENST00000453661 1398 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AP002364.1-201ENST00000623330 3386 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 AC127024.8-201ENST00000623719 2094 ntBASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SHANK2Q9UPX8 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 RNA5SP350-201ENST00000363298 111 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 VN1R110P-201ENST00000438988 971 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AC064862.4-201ENST00000442180 334 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AC112191.2-201ENST00000522428 333 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AC010547.6-201ENST00000571789 193 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 AC092944.2-201ENST00000605443 889 ntBASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.21□□□□□ -0.93
SHANK2Q9UPX8 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SHANK2Q9UPX8 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms