Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 FTH1P8-201ENST00000498161 514 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 IGHV4-55-201ENST00000520889 368 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 NANOGNBP2-201ENST00000544753 553 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 RN7SL230P-201ENST00000580835 303 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 TMCC1P1-201ENST00000518897 1980 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SNORA70H-201ENST00000383910 135 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SNORA70J-201ENST00000384182 135 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 RN7SKP161-201ENST00000411110 305 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC002127.1-201ENST00000421305 225 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AL389925.1-201ENST00000432257 728 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 OR3D1P-201ENST00000438288 955 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 HSD3BP3-201ENST00000514706 994 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 RN7SKP288-201ENST00000516227 268 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC009879.1-201ENST00000520029 839 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC090616.1-201ENST00000583895 447 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC091193.1-201ENST00000604640 448 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 AC097641.3-201ENST00000613523 464 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 Z95114.1-201ENST00000624264 14574 ntBASIC6.04□□□□□ -1.44
CCDC88CQ9P219 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC88CQ9P219 MAPK10-287ENST00000641217 3037 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 PPIAP27-201ENST00000453800 265 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC139272.1-201ENST00000505516 640 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC131392.1-201ENST00000506490 633 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC095052.1-201ENST00000509955 863 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC233702.7-202ENST00000582941 211 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL080312.2-201ENST00000613001 630 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 MIR6085-201ENST00000618314 110 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC025262.3-201ENST00000623666 360 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AP001052.1-201ENST00000626421 99 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL132640.3-201ENST00000630473 177 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC011815.2-201ENST00000618230 2021 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC092724.1-201ENST00000624623 3397 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC022507.1-201ENST00000548349 1505 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 CASC19-246ENST00000641625 1606 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL138899.2-201ENST00000439139 499 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC084754.1-201ENST00000463466 464 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC094085.1-201ENST00000468914 584 ntBASIC6.03□□□□□ -1.44
CCDC88CQ9P219 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms