Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.56□□□□□ -1.36
TRIM4Q9C037 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM4Q9C037 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM4Q9C037 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM4Q9C037 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM4Q9C037 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TRIM4Q9C037 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM4Q9C037 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM4Q9C037 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 RN7SKP55-201ENST00000364888 307 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 RNA5SP152-201ENST00000365184 110 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 RNA5SP279-201ENST00000365513 117 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 RN7SKP91-201ENST00000410852 288 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 LYPLA1P1-201ENST00000434514 622 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 BX679664.2-201ENST00000439282 283 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 RPL34P34-201ENST00000465389 354 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC083806.1-201ENST00000468934 316 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 UOX-201ENST00000471089 899 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC093719.1-201ENST00000480427 441 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC021006.1-201ENST00000489849 553 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 OR5M6P-201ENST00000530227 937 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC233699.1-201ENST00000569955 1168 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 AC025262.3-201ENST00000623666 360 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 SNX18P10-201ENST00000625014 519 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 CASC19-274ENST00000642018 970 ntBASIC6.55□□□□□ -1.36
TRIM4Q9C037 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TRIM4Q9C037 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM4Q9C037 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AP005139.1-201ENST00000580702 1647 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 RNA5SP431-201ENST00000410312 120 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC007568.1-201ENST00000422912 471 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 SETP9-201ENST00000423837 832 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AL031846.1-201ENST00000560933 314 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 PPIAP14-201ENST00000577627 496 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 AL136097.3-201ENST00000611097 505 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 RN7SL126P-201ENST00000616400 299 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC087894.3-201ENST00000623682 349 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
TRIM4Q9C037 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC129502.1-201ENST00000623261 1654 ntBASIC6.54□□□□□ -1.36
TRIM4Q9C037 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM4Q9C037 AC005725.1-201ENST00000577346 2607 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms