Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AL513218.1-201ENST00000606527 391 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AL080312.2-201ENST00000613001 630 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AC024255.1-201ENST00000614376 102 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 MIR6721-201ENST00000617181 87 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 CASC19-274ENST00000642018 970 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 GUCY1B2-204ENST00000531898 1979 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 AC112243.1-201ENST00000623949 3851 ntBASIC6.34□□□□□ -1.39
ECHDC3Q96DC8 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 Z93929.1-201ENST00000418200 1475 ntBASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 AL157831.2-201ENST00000564681 3095 ntBASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.34□□□□□ -1.4
ECHDC3Q96DC8 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC005034.3-201ENST00000604845 1747 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RNA5SP478-201ENST00000364657 115 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RNA5SP279-201ENST00000365513 117 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RN7SKP187-201ENST00000365536 330 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RPL6P21-201ENST00000418672 846 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC092865.3-201ENST00000425390 1026 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC108479.1-201ENST00000431142 427 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AL645936.1-201ENST00000441979 518 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AL590004.3-202ENST00000445883 451 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RN7SL649P-201ENST00000496974 275 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC095052.1-201ENST00000509955 863 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 MIR3154-201ENST00000577829 84 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RPSAP75-201ENST00000605848 301 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 TCL6_3.1-201ENST00000619064 137 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 AL683826.1-201ENST00000624104 627 ntBASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ECHDC3Q96DC8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AL133243.2-201ENST00000610331 1621 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC006213.6-201ENST00000623722 4179 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AC009831.5-201ENST00000624000 3189 ntBASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.32□□□□□ -1.4
ECHDC3Q96DC8 UBE2V1P14-201ENST00000415815 558 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms