Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC010329.1-201ENST00000593903 8328 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 AC023245.2-201ENST00000530760 2978 ntBASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
H3F3CQ6NXT2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
H3F3CQ6NXT2 CASC19-246ENST00000641625 1606 ntBASIC5.96□□□□□ -1.45
H3F3CQ6NXT2 NR1H5P-201ENST00000452683 1377 ntBASIC5.96□□□□□ -1.45
H3F3CQ6NXT2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 RPL11P4-201ENST00000332269 436 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 RNA5SP279-201ENST00000365513 117 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 RPL7P58-201ENST00000402913 758 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AK3P5-201ENST00000432033 519 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 GAPDHP34-201ENST00000432112 823 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 EMC3-AS1-205ENST00000438698 534 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 RN7SL643P-201ENST00000471845 291 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 KHDC1P1-201ENST00000511053 508 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 BCAS2P1-201ENST00000528022 632 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC084121.1-201ENST00000533882 835 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 DPPA3P2-202ENST00000557188 1219 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 TPRX1P1-201ENST00000557620 319 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC002519.2-203ENST00000567043 837 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AC015818.6-201ENST00000584274 634 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 TATDN2P3-201ENST00000452855 3665 ntBASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.96□□□□□ -1.46
H3F3CQ6NXT2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 RN7SKP281-201ENST00000410472 352 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AL035422.1-201ENST00000414193 397 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 OSTCP4-201ENST00000424397 449 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC125238.2-201ENST00000430003 1440 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC108479.1-201ENST00000431142 427 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 MRPS21P3-201ENST00000436696 262 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 RNA5SP441-201ENST00000516809 88 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 SNORA81.2-201ENST00000516868 170 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC073581.1-201ENST00000519036 575 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 IGHV4-55-201ENST00000520889 368 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AP004607.6-201ENST00000525033 1202 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AL845552.1-201ENST00000556820 323 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC134669.1-201ENST00000581275 672 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AL499605.1-201ENST00000604628 403 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC073046.2-201ENST00000604756 527 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC073592.6-201ENST00000624271 415 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AP001052.1-201ENST00000626421 99 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC011455.2-201ENST00000599320 3336 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AL359694.2-201ENST00000567753 1615 ntBASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 SAGE3P-201ENST00000619800 1635 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms