Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP001823.1-201ENST00000604056 1003 ntBASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 AL157899.1-201ENST00000604110 936 ntBASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 RFPL4AP6-201ENST00000616792 846 ntBASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 AC009948.3-201ENST00000603415 1798 ntBASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LYSMD4Q5XG99 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 CYP2G2P-201ENST00000594920 1485 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 RNA5SP110-201ENST00000362638 115 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 RNU1-46P-201ENST00000384425 164 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AL161636.2-201ENST00000445179 927 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 HIGD1AP16-201ENST00000450986 258 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 RPL23AP68-201ENST00000480924 445 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 MTND6P8-201ENST00000503471 522 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC068305.2-201ENST00000550567 1205 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC138915.4-201ENST00000565549 4147 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 NPM1P45-201ENST00000583151 559 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC005332.4-201ENST00000592752 579 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LYSMD4Q5XG99 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 CIR1P2-201ENST00000514821 1342 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 RARSP1-201ENST00000542842 1418 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 RNA5SP477-201ENST00000362639 119 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 LYPLA1P1-201ENST00000434514 622 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 CFL1P4-201ENST00000451536 498 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 CST12P-201ENST00000457644 362 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 RPL34P33-201ENST00000486062 334 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC083906.1-201ENST00000509298 406 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 RPA2P1-201ENST00000556557 721 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC090616.1-201ENST00000583895 447 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 NPIPB1P-202ENST00000588786 828 ntBASIC6.28□□□□□ -1.4
LYSMD4Q5XG99 AC126175.1-201ENST00000617041 758 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms