Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC083906.1-201ENST00000509298 406 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 NPM1P21-201ENST00000513394 762 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC021820.1-201ENST00000525564 808 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC106785.4-201ENST00000569492 412 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC133552.4-201ENST00000576103 676 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 WDR45BP1-201ENST00000583470 1029 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC015802.5-201ENST00000607478 399 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC073592.7-201ENST00000623659 507 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 AC087565.3-202ENST00000642085 1603 ntBASIC6.82□□□□□ -1.32
CCDC38Q502W7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC38Q502W7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC38Q502W7 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC005261.2-201ENST00000593427 4258 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 RNU1-55P-201ENST00000365510 158 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 RAB5CP1-201ENST00000395972 580 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AL451046.1-201ENST00000406097 534 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 RN7SKP117-201ENST00000410175 264 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AL139415.1-201ENST00000424862 352 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC092646.1-201ENST00000427142 901 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC009362.1-201ENST00000427253 406 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 RPS26P11-201ENST00000463445 348 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 RPS26P6-201ENST00000475156 348 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 NPM1P27-201ENST00000502784 830 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 SNX18P23-201ENST00000510867 677 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC134698.1-201ENST00000511619 643 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 RNA5SP75-201ENST00000516841 111 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC026688.1-201ENST00000520639 1168 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC091932.1-201ENST00000569381 427 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 RN7SL270P-201ENST00000579643 281 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC024085.1-201ENST00000604299 432 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 FXYD6P1-201ENST00000604857 285 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AL353807.4-201ENST00000604995 257 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC023206.1-201ENST00000605824 298 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC009283.1-201ENST00000615852 645 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC38Q502W7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 AC083837.1-201ENST00000565297 2994 ntBASIC6.81□□□□□ -1.32
CCDC38Q502W7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC38Q502W7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC38Q502W7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC38Q502W7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC38Q502W7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
CCDC38Q502W7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC38Q502W7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC38Q502W7 BX284613.1-201ENST00000452221 1641 ntBASIC6.8□□□□□ -1.32
CCDC38Q502W7 AC006511.3-201ENST00000624929 1783 ntBASIC6.8□□□□□ -1.32
CCDC38Q502W7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC38Q502W7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC38Q502W7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms