Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AP001646.2-201ENST00000528645 1156 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.33□□□□□ -1.4
NR1H2P55055 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.33□□□□□ -1.4
NR1H2P55055 PRR13P5-201ENST00000596581 442 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC005520.3-201ENST00000602874 370 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC092960.1-201ENST00000604762 351 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 HTR1DP1-201ENST00000616500 888 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC005899.7-201ENST00000618199 588 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 AL162377.2-201ENST00000624532 337 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC004808.2-201ENST00000627965 773 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC135068.11-201ENST00000636378 921 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC091948.2-201ENST00000636510 279 ntBASIC6.33□□□□□ -1.4
NR1H2P55055 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NR1H2P55055 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.33□□□□□ -1.4
NR1H2P55055 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NR1H2P55055 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NR1H2P55055 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
NR1H2P55055 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NR1H2P55055 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NR1H2P55055 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NR1H2P55055 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NR1H2P55055 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.32□□□□□ -1.4
NR1H2P55055 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 AC027575.3-201ENST00000583058 2747 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 RN7SKP107-201ENST00000364157 290 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 ST13P16-201ENST00000401760 781 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 RPS26P38-201ENST00000414476 348 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 SETP9-201ENST00000423837 832 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.32□□□□□ -1.4
NR1H2P55055 MTCO1P45-201ENST00000431457 267 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 AL604028.2-201ENST00000437848 788 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 BUD31P2-201ENST00000449374 300 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.32□□□□□ -1.4
NR1H2P55055 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 RN7SL392P-201ENST00000473024 299 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.32□□□□□ -1.4
NR1H2P55055 AC093815.1-201ENST00000508637 280 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 RBMS2P1-201ENST00000525031 1226 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AP003168.1-201ENST00000530091 307 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.32□□□□□ -1.4
NR1H2P55055 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.32□□□□□ -1.4
NR1H2P55055 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 RPSAP66-201ENST00000592196 606 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 OR7E161P-202ENST00000641994 1033 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AC140479.2-201ENST00000421567 3130 ntBASIC6.32□□□□□ -1.4
NR1H2P55055 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NR1H2P55055 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NR1H2P55055 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.32□□□□□ -1.4
NR1H2P55055 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NR1H2P55055 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NR1H2P55055 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NR1H2P55055 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NR1H2P55055 AC130360.2-201ENST00000533477 1556 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.31□□□□□ -1.4
NR1H2P55055 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NR1H2P55055 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.31□□□□□ -1.4
NR1H2P55055 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.31□□□□□ -1.4
NR1H2P55055 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NR1H2P55055 AL592429.1-201ENST00000403909 1473 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.31□□□□□ -1.4
NR1H2P55055 RNA5SP114-201ENST00000363780 113 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.31□□□□□ -1.4
NR1H2P55055 RNU11-201ENST00000387069 134 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 RNU11-6P-201ENST00000391127 133 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.31□□□□□ -1.4
NR1H2P55055 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NR1H2P55055 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NR1H2P55055 AL356806.1-201ENST00000422524 916 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms