Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RN7SKP121-201ENST00000410842 305 ntBASIC6.71□□□□□ -1.34
LHX1P48742 RN7SKP144-201ENST00000411108 279 ntBASIC6.71□□□□□ -1.34
LHX1P48742 AC097721.1-201ENST00000427150 1253 ntBASIC6.71□□□□□ -1.34
LHX1P48742 RPSAP65-201ENST00000429660 595 ntBASIC6.71□□□□□ -1.34
LHX1P48742 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 AL133351.3-201ENST00000454998 193 ntBASIC6.71□□□□□ -1.34
LHX1P48742 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX1P48742 AC011853.1-201ENST00000518911 454 ntBASIC6.71□□□□□ -1.34
LHX1P48742 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.71□□□□□ -1.34
LHX1P48742 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX1P48742 AL121579.2-201ENST00000555466 590 ntBASIC6.71□□□□□ -1.34
LHX1P48742 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.71□□□□□ -1.34
LHX1P48742 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.71□□□□□ -1.34
LHX1P48742 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.71□□□□□ -1.34
LHX1P48742 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.71□□□□□ -1.34
LHX1P48742 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
LHX1P48742 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
LHX1P48742 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LHX1P48742 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
LHX1P48742 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LHX1P48742 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 CAP1P2-201ENST00000417455 1409 ntBASIC6.7□□□□□ -1.34
LHX1P48742 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 AC110716.2-201ENST00000563865 3945 ntBASIC6.7□□□□□ -1.34
LHX1P48742 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LHX1P48742 RNA5SP346-201ENST00000363541 121 ntBASIC6.7□□□□□ -1.34
LHX1P48742 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 MIR621-201ENST00000384919 96 ntBASIC6.7□□□□□ -1.34
LHX1P48742 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 NPM1P36-201ENST00000415681 835 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 RPS7P14-201ENST00000426405 583 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AL354707.3-201ENST00000427308 331 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AL590004.3-202ENST00000445883 451 ntBASIC6.7□□□□□ -1.34
LHX1P48742 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.7□□□□□ -1.34
LHX1P48742 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 HIGD1AP16-201ENST00000450986 258 ntBASIC6.7□□□□□ -1.34
LHX1P48742 RPL37P23-201ENST00000492641 294 ntBASIC6.7□□□□□ -1.34
LHX1P48742 RPL12P7-201ENST00000493832 494 ntBASIC6.7□□□□□ -1.34
LHX1P48742 SNX18P24-201ENST00000505249 671 ntBASIC6.7□□□□□ -1.34
LHX1P48742 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LHX1P48742 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX1P48742 AC096754.1-201ENST00000508904 818 ntBASIC6.7□□□□□ -1.34
LHX1P48742 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.7□□□□□ -1.34
LHX1P48742 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.7□□□□□ -1.34
LHX1P48742 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.7□□□□□ -1.34
LHX1P48742 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.7□□□□□ -1.34
LHX1P48742 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 AC103968.1-201ENST00000557841 573 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.7□□□□□ -1.34
LHX1P48742 AL049840.6-202ENST00000603373 279 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AC124916.2-201ENST00000604416 224 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 AL080312.2-201ENST00000613001 630 ntBASIC6.7□□□□□ -1.34
LHX1P48742 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.7□□□□□ -1.34
LHX1P48742 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 OR52B5P-204ENST00000641744 3467 ntBASIC6.7□□□□□ -1.34
LHX1P48742 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LHX1P48742 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 AC022905.1-201ENST00000503430 3048 ntBASIC6.7□□□□□ -1.34
LHX1P48742 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms