Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
COL15A1P39059 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL15A1P39059 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8□□□□□ -1.13
COL15A1P39059 CIR1P2-201ENST00000514821 1342 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8□□□□□ -1.13
COL15A1P39059 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
COL15A1P39059 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC8□□□□□ -1.13
COL15A1P39059 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8□□□□□ -1.13
COL15A1P39059 AL139415.1-201ENST00000424862 352 ntBASIC8□□□□□ -1.13
COL15A1P39059 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8□□□□□ -1.13
COL15A1P39059 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8□□□□□ -1.13
COL15A1P39059 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 TRIM36-IT1-201ENST00000503723 881 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC253576.1-201ENST00000511645 1156 ntBASIC8□□□□□ -1.13
COL15A1P39059 RNA5SP438-201ENST00000516561 112 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC073581.1-201ENST00000519036 575 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8□□□□□ -1.13
COL15A1P39059 RPA2P1-201ENST00000556557 721 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8□□□□□ -1.13
COL15A1P39059 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC8□□□□□ -1.13
COL15A1P39059 AL513218.1-201ENST00000606527 391 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC108673.3-201ENST00000609183 335 ntBASIC8□□□□□ -1.13
COL15A1P39059 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 AC107308.1-201ENST00000615897 301 ntBASIC8□□□□□ -1.13
COL15A1P39059 AC127024.6-201ENST00000621598 424 ntBASIC8□□□□□ -1.13
COL15A1P39059 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 AC119674.1-217ENST00000641942 1086 ntBASIC8□□□□□ -1.13
COL15A1P39059 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8□□□□□ -1.13
COL15A1P39059 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 Z82209.2-201ENST00000623410 2012 ntBASIC8□□□□□ -1.13
COL15A1P39059 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8□□□□□ -1.13
COL15A1P39059 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8□□□□□ -1.13
COL15A1P39059 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
COL15A1P39059 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL15A1P39059 U3.43-201ENST00000410734 213 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC7.99□□□□□ -1.13
COL15A1P39059 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.99□□□□□ -1.13
COL15A1P39059 RN7SL177P-201ENST00000476596 299 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 AP001858.2-201ENST00000536213 601 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.99□□□□□ -1.13
COL15A1P39059 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.99□□□□□ -1.13
COL15A1P39059 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC7.99□□□□□ -1.13
COL15A1P39059 AC097467.4-201ENST00000605504 141 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 MIR7159-201ENST00000620587 66 ntBASIC7.99□□□□□ -1.13
COL15A1P39059 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL15A1P39059 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL15A1P39059 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
COL15A1P39059 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
COL15A1P39059 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.99□□□□□ -1.13
COL15A1P39059 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.99□□□□□ -1.13
COL15A1P39059 MAPK10-287ENST00000641217 3037 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 OR52B3P-201ENST00000314715 928 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
COL15A1P39059 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 RNA5SP178-201ENST00000410380 128 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.98□□□□□ -1.13
COL15A1P39059 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 AL161636.2-201ENST00000445179 927 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 AC011476.1-201ENST00000466725 307 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.98□□□□□ -1.13
COL15A1P39059 UBFD1P1-201ENST00000473259 814 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 RN7SL284P-201ENST00000498823 275 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.98□□□□□ -1.13
COL15A1P39059 SCARNA18.1-201ENST00000516330 83 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.98□□□□□ -1.13
COL15A1P39059 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.98□□□□□ -1.13
COL15A1P39059 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 AL512624.1-201ENST00000613638 469 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 AC126175.1-201ENST00000617041 758 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 AC245014.3-201ENST00000618589 347 ntBASIC7.98□□□□□ -1.13
COL15A1P39059 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.98□□□□□ -1.13
COL15A1P39059 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.98□□□□□ -1.13
COL15A1P39059 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
COL15A1P39059 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms