Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.78□□□□□ -1.32
HOXC13P31276 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 AC013488.1-201ENST00000526618 1838 ntBASIC6.78□□□□□ -1.32
HOXC13P31276 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HOXC13P31276 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
HOXC13P31276 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.78□□□□□ -1.32
HOXC13P31276 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HOXC13P31276 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
HOXC13P31276 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
HOXC13P31276 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC13P31276 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC13P31276 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC13P31276 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HOXC13P31276 RNA5SP485-201ENST00000365053 119 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 RNU1-84P-201ENST00000365447 164 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 AC007068.1-201ENST00000396690 844 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 RPL23AP85-201ENST00000421838 433 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 AL020997.1-201ENST00000446554 349 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 NPM1P5-201ENST00000557228 838 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.77□□□□□ -1.33
HOXC13P31276 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HOXC13P31276 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.77□□□□□ -1.33
HOXC13P31276 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 AC010624.4-201ENST00000597606 1351 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC13P31276 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 CDY5P-201ENST00000411487 1580 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 CDY9P-201ENST00000451397 1580 ntBASIC6.77□□□□□ -1.33
HOXC13P31276 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.77□□□□□ -1.33
HOXC13P31276 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HOXC13P31276 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HOXC13P31276 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC13P31276 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
HOXC13P31276 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HOXC13P31276 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC13P31276 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC13P31276 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC13P31276 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC13P31276 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.76□□□□□ -1.33
HOXC13P31276 MIR188-201ENST00000385034 86 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC13P31276 AL023284.3-201ENST00000407767 334 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 AC092824.1-201ENST00000483524 576 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 RPL5P14-201ENST00000494197 878 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC13P31276 ZNF519P4-201ENST00000514008 125 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 SNORA81.2-201ENST00000516868 170 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 IGLVIV-64-201ENST00000518581 301 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 COX6B1P4-201ENST00000519826 484 ntBASIC6.76□□□□□ -1.33
HOXC13P31276 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC13P31276 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms