Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 Y_RNA.402-201ENST00000383972 102 ntBASIC8.19□□□□□ -1.1
VARSP26640 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
VARSP26640 MIR1296-201ENST00000408136 92 ntBASIC8.19□□□□□ -1.1
VARSP26640 MED15P8-201ENST00000411601 545 ntBASIC8.19□□□□□ -1.1
VARSP26640 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.19□□□□□ -1.1
VARSP26640 AC073367.1-201ENST00000421480 697 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 AC116050.1-206ENST00000423774 213 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC104843.2-201ENST00000427666 297 ntBASIC8.19□□□□□ -1.1
VARSP26640 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 ARMC4P1-201ENST00000438905 707 ntBASIC8.19□□□□□ -1.1
VARSP26640 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.19□□□□□ -1.1
VARSP26640 OR2AI1P-201ENST00000448534 932 ntBASIC8.19□□□□□ -1.1
VARSP26640 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 RPL21P92-201ENST00000454107 476 ntBASIC8.19□□□□□ -1.1
VARSP26640 PNPLA4P1-201ENST00000458328 305 ntBASIC8.19□□□□□ -1.1
VARSP26640 MTND1P16-201ENST00000465177 898 ntBASIC8.19□□□□□ -1.1
VARSP26640 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 RN7SL107P-201ENST00000478127 283 ntBASIC8.19□□□□□ -1.1
VARSP26640 RPS4XP15-201ENST00000489210 795 ntBASIC8.19□□□□□ -1.1
VARSP26640 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 RPL7P24-201ENST00000493052 752 ntBASIC8.19□□□□□ -1.1
VARSP26640 CCDC11P1-201ENST00000503137 1162 ntBASIC8.19□□□□□ -1.1
VARSP26640 HMGB1P44-201ENST00000508597 572 ntBASIC8.19□□□□□ -1.1
VARSP26640 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 IGHV3-32-201ENST00000519182 355 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 AC078886.1-201ENST00000549144 554 ntBASIC8.19□□□□□ -1.1
VARSP26640 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.19□□□□□ -1.1
VARSP26640 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.19□□□□□ -1.1
VARSP26640 AC090826.1-203ENST00000569235 490 ntBASIC8.19□□□□□ -1.1
VARSP26640 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 MIR3680-2-201ENST00000578247 87 ntBASIC8.19□□□□□ -1.1
VARSP26640 MIR3680-1-201ENST00000581433 87 ntBASIC8.19□□□□□ -1.1
VARSP26640 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 AC010928.3-201ENST00000587712 541 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 AL121928.1-201ENST00000608017 521 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC068726.1-201ENST00000610993 341 ntBASIC8.19□□□□□ -1.1
VARSP26640 AL365204.3-201ENST00000612448 685 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC079801.1-201ENST00000623753 388 ntTSL 3 BASIC8.19□□□□□ -1.1
VARSP26640 AC138305.3-201ENST00000624988 240 ntBASIC8.19□□□□□ -1.1
VARSP26640 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 STX2-203ENST00000392373 2151 ntAPPRIS P4 TSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
VARSP26640 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 AL512504.2-201ENST00000445455 1909 ntBASIC8.19□□□□□ -1.1
VARSP26640 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.19□□□□□ -1.1
VARSP26640 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 ZNF840P-201ENST00000504759 1996 ntBASIC8.19□□□□□ -1.1
VARSP26640 AC016582.1-202ENST00000636341 2982 ntBASIC8.19□□□□□ -1.1
VARSP26640 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARSP26640 FMO9P-202ENST00000488458 1535 ntBASIC8.19□□□□□ -1.1
VARSP26640 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.18□□□□□ -1.1
VARSP26640 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 AC012360.3-201ENST00000610036 3449 ntBASIC8.18□□□□□ -1.1
VARSP26640 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARSP26640 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.18□□□□□ -1.1
VARSP26640 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms