Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC090983.1-201ENST00000623426 3897 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 ZNF876P-202ENST00000398732 1485 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 RNA5SP85-201ENST00000365378 119 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 SFR1P1-201ENST00000403720 688 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 RAB9AP4-201ENST00000415230 609 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 PTGES3P5-201ENST00000455109 434 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 PGBD4P1-201ENST00000473644 407 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 RN7SL379P-201ENST00000479912 293 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC010374.1-201ENST00000503762 1237 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 RNA5SP318-201ENST00000516352 92 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 Vault.2-201ENST00000516519 98 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRAP18433 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRAP18433 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.14□□□□□ -1.11
PTPRAP18433 ULK4P2-202ENST00000564187 492 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.14□□□□□ -1.11
PTPRAP18433 ACTG1P15-201ENST00000570019 1063 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 MIR4271-201ENST00000582451 67 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 AL513548.2-201ENST00000602994 1207 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 WBP1LP12-201ENST00000604449 331 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
PTPRAP18433 TRIM51HP-202ENST00000530412 1823 ntBASIC8.14□□□□□ -1.11
PTPRAP18433 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.14□□□□□ -1.11
PTPRAP18433 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PTPRAP18433 TPTE2P2-201ENST00000403471 1466 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC006058.1-201ENST00000568686 5067 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTPRAP18433 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTPRAP18433 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRAP18433 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 AL356320.2-201ENST00000417263 507 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC093422.3-201ENST00000428506 305 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 TIMM8BP2-201ENST00000445940 251 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 EXTL2P1-201ENST00000446218 416 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 EEF1B2P3-201ENST00000447718 678 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRAP18433 AC096922.1-201ENST00000461635 651 ntBASIC8.13□□□□□ -1.11
PTPRAP18433 OR7E22P-201ENST00000478335 1035 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms