Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CU639417.4-201ENST00000623928 207 ntBASIC10.67□□□□□ -0.7
TOP2AP11388 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TOP2AP11388 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TOP2AP11388 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC10.67□□□□□ -0.7
TOP2AP11388 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC10.66□□□□□ -0.7
TOP2AP11388 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 SELENOWP1-201ENST00000322792 252 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 RNA5SP234-201ENST00000363916 119 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 MROH3P-201ENST00000435735 2676 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 YWHABP1-201ENST00000445359 727 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 AC104164.1-201ENST00000460282 590 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 AL157777.1-201ENST00000468100 304 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 RN7SL727P-201ENST00000482164 296 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 RN7SL466P-201ENST00000497546 295 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC10.66□□□□□ -0.7
TOP2AP11388 AC027026.1-201ENST00000532323 742 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TOP2AP11388 AC020978.8-201ENST00000571975 3022 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC10.66□□□□□ -0.7
TOP2AP11388 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC10.66□□□□□ -0.7
TOP2AP11388 AC079776.5-201ENST00000641920 211 ntBASIC10.66□□□□□ -0.7
TOP2AP11388 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TOP2AP11388 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC10.66□□□□□ -0.7
TOP2AP11388 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 AP001541.1-201ENST00000623322 1904 ntBASIC10.65□□□□□ -0.7
TOP2AP11388 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 AC078880.4-201ENST00000617627 1749 ntBASIC10.65□□□□□ -0.7
TOP2AP11388 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 RN7SKP160-201ENST00000363804 340 ntBASIC10.65□□□□□ -0.7
TOP2AP11388 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC10.65□□□□□ -0.7
TOP2AP11388 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC10.65□□□□□ -0.7
TOP2AP11388 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TOP2AP11388 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC10.65□□□□□ -0.7
TOP2AP11388 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 CASP5-209ENST00000531367 879 ntTSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC10.65□□□□□ -0.7
TOP2AP11388 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC10.65□□□□□ -0.7
TOP2AP11388 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
TOP2AP11388 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC10.65□□□□□ -0.7
TOP2AP11388 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TOP2AP11388 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
TOP2AP11388 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TOP2AP11388 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
TOP2AP11388 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
TOP2AP11388 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.65□□□□□ -0.71
TOP2AP11388 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TOP2AP11388 RN7SKP162-201ENST00000363605 345 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 RNA5SP394-201ENST00000364216 119 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 RPL36P18-201ENST00000419316 318 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC10.64□□□□□ -0.71
TOP2AP11388 TUBB4BP6-201ENST00000437576 479 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC10.64□□□□□ -0.71
TOP2AP11388 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC10.64□□□□□ -0.71
TOP2AP11388 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC10.64□□□□□ -0.71
TOP2AP11388 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC10.64□□□□□ -0.71
TOP2AP11388 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
TOP2AP11388 AC119403.2-201ENST00000590960 598 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC10.64□□□□□ -0.71
TOP2AP11388 MIR193BHG-214ENST00000641765 509 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC10.64□□□□□ -0.71
TOP2AP11388 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TOP2AP11388 ITPK1-AS1-201ENST00000553639 4701 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 Z83820.1-201ENST00000456978 1499 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
TOP2AP11388 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
TOP2AP11388 CASC19-205ENST00000641013 1411 ntBASIC10.64□□□□□ -0.71
TOP2AP11388 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC10.64□□□□□ -0.71
TOP2AP11388 RPS17P15-201ENST00000475609 349 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 ATG10-208ENST00000513634 618 ntTSL 2 BASIC10.63□□□□□ -0.71
TOP2AP11388 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC10.63□□□□□ -0.71
TOP2AP11388 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC10.63□□□□□ -0.71
TOP2AP11388 SDR42E1P1-201ENST00000611327 477 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC10.63□□□□□ -0.71
TOP2AP11388 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
TOP2AP11388 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
TOP2AP11388 CCNT2P1-201ENST00000423082 1315 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 AP002370.1-201ENST00000528055 1602 ntBASIC10.63□□□□□ -0.71
TOP2AP11388 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms