Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 MIR4271-201ENST00000582451 67 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 MIR4310-201ENST00000582950 57 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC068768.2-201ENST00000602352 343 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.72□□□□□ -1.49
FREM3P0C091 AL135999.3-201ENST00000610501 812 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC097641.3-201ENST00000613523 464 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC096708.4-201ENST00000620563 552 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AL731556.1-201ENST00000394628 3711 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 Z93929.1-201ENST00000418200 1475 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 AC104966.1-201ENST00000467010 1464 ntBASIC5.72□□□□□ -1.49
FREM3P0C091 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.72□□□□□ -1.49
FREM3P0C091 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
FREM3P0C091 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.71□□□□□ -1.49
FREM3P0C091 SMG1P5-202ENST00000529428 4219 ntBASIC5.71□□□□□ -1.49
FREM3P0C091 SMG1P2-201ENST00000566127 4221 ntBASIC5.71□□□□□ -1.49
FREM3P0C091 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FREM3P0C091 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
FREM3P0C091 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
FREM3P0C091 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.49
FREM3P0C091 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.49
FREM3P0C091 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 AL050335.1-201ENST00000396909 869 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 RN7SKP240-201ENST00000410583 375 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 PNKDP1-201ENST00000435914 430 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 AC016724.1-201ENST00000453215 421 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AL133351.3-201ENST00000454998 193 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 NDUFA5P5-201ENST00000468361 342 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 H3F3AP5-201ENST00000475267 429 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.71□□□□□ -1.5
FREM3P0C091 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.71□□□□□ -1.5
FREM3P0C091 AC023968.1-201ENST00000560719 475 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.71□□□□□ -1.5
FREM3P0C091 AP001885.1-201ENST00000621658 558 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 SNX18P12-201ENST00000624821 759 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.71□□□□□ -1.5
FREM3P0C091 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
FREM3P0C091 FAM32BP-201ENST00000344033 333 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.71□□□□□ -1.5
FREM3P0C091 LYPLA1P3-201ENST00000402650 695 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AC002069.1-201ENST00000429649 1159 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.71□□□□□ -1.5
FREM3P0C091 AC084754.1-201ENST00000463466 464 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.71□□□□□ -1.5
FREM3P0C091 AC114781.3-201ENST00000512083 142 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.71□□□□□ -1.5
FREM3P0C091 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.71□□□□□ -1.5
FREM3P0C091 AC005632.2-201ENST00000564271 828 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 MIR3614-201ENST00000581261 86 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.71□□□□□ -1.5
FREM3P0C091 RFPL4AP6-201ENST00000616792 846 ntBASIC5.71□□□□□ -1.5
FREM3P0C091 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 AC011815.2-201ENST00000618230 2021 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.7□□□□□ -1.5
FREM3P0C091 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC5.7□□□□□ -1.5
FREM3P0C091 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
FREM3P0C091 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.7□□□□□ -1.5
FREM3P0C091 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
FREM3P0C091 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
FREM3P0C091 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
FREM3P0C091 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
FREM3P0C091 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.7□□□□□ -1.5
FREM3P0C091 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.7□□□□□ -1.5
FREM3P0C091 RBBP4P5-201ENST00000398583 1266 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 CYP4F30P-202ENST00000420048 405 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.7□□□□□ -1.5
FREM3P0C091 OR52I1-201ENST00000450052 1050 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 RN7SL254P-201ENST00000460609 284 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 RPL12P24-201ENST00000474907 486 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 RPL17P2-201ENST00000491913 451 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.7□□□□□ -1.5
FREM3P0C091 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FREM3P0C091 OR4H6P-201ENST00000563771 921 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 LINC00556-201ENST00000569603 412 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.7□□□□□ -1.5
FREM3P0C091 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.7□□□□□ -1.5
FREM3P0C091 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.7□□□□□ -1.5
FREM3P0C091 MIR6071-201ENST00000616741 78 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms