Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC3.71□□□□□ -1.82
APOBP04114 AL390318.1-201ENST00000624564 687 ntBASIC3.71□□□□□ -1.82
APOBP04114 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 HDAC1P2-201ENST00000453661 1398 ntBASIC3.71□□□□□ -1.82
APOBP04114 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 OR5M2P-202ENST00000641241 4242 ntBASIC3.71□□□□□ -1.82
APOBP04114 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 DUTP5-201ENST00000406790 469 ntBASIC3.71□□□□□ -1.82
APOBP04114 DUTP4-201ENST00000424782 475 ntBASIC3.71□□□□□ -1.82
APOBP04114 BX119917.1-201ENST00000432517 502 ntBASIC3.71□□□□□ -1.82
APOBP04114 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 STRADBP1-201ENST00000478954 1281 ntBASIC3.71□□□□□ -1.82
APOBP04114 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 TAS2R6P-201ENST00000605022 826 ntBASIC3.71□□□□□ -1.82
APOBP04114 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 AC119674.1-204ENST00000641348 1343 ntBASIC3.71□□□□□ -1.82
APOBP04114 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 MAPK10-304ENST00000641341 3984 ntBASIC3.71□□□□□ -1.82
APOBP04114 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 AC126755.2-208ENST00000327792 462 ntBASIC3.71□□□□□ -1.82
APOBP04114 AC138969.1-213ENST00000331436 462 ntBASIC3.71□□□□□ -1.82
APOBP04114 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 AL360271.1-201ENST00000395679 510 ntBASIC3.71□□□□□ -1.82
APOBP04114 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 AC245047.2-201ENST00000441060 530 ntBASIC3.71□□□□□ -1.82
APOBP04114 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.71□□□□□ -1.82
APOBP04114 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC3.71□□□□□ -1.82
APOBP04114 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ERG-206ENST00000398911 4914 ntTSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
APOBP04114 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
APOBP04114 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
APOBP04114 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC3.7□□□□□ -1.82
APOBP04114 RPL7P45-201ENST00000455851 743 ntBASIC3.7□□□□□ -1.82
APOBP04114 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.7□□□□□ -1.82
APOBP04114 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC3.7□□□□□ -1.82
APOBP04114 AL118522.2-201ENST00000616045 615 ntBASIC3.7□□□□□ -1.82
APOBP04114 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.7□□□□□ -1.82
APOBP04114 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
APOBP04114 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
APOBP04114 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms