Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 AC092720.2-201ENST00000602388 1665 ntBASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX49Q9Y6V7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 ESRRAP1-201ENST00000400596 1257 ntBASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
DDX49Q9Y6V7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
DDX49Q9Y6V7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 AC093827.2-201ENST00000512654 315 ntBASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
DDX49Q9Y6V7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
DDX49Q9Y6V7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
DDX49Q9Y6V7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.64■■□□□ 1.38
DDX49Q9Y6V7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
DDX49Q9Y6V7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
DDX49Q9Y6V7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
DDX49Q9Y6V7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
DDX49Q9Y6V7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.64■■□□□ 1.37
DDX49Q9Y6V7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms