Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 AC010653.2-201ENST00000623505 997 ntBASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PTCH2Q9Y6C5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 AC246785.2-201ENST00000432512 513 ntBASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 AC011298.2-201ENST00000617989 482 ntBASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 RCC2P6-201ENST00000526625 1557 ntBASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PTCH2Q9Y6C5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 KRT8P20-201ENST00000423953 1409 ntBASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 SLC25A1P2-201ENST00000430693 912 ntBASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PTCH2Q9Y6C5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.43■■□□□ 1.18
PTCH2Q9Y6C5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 AL441883.1-201ENST00000566170 1045 ntBASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PTCH2Q9Y6C5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 AC092338.2-201ENST00000568827 1415 ntBASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 AC096733.2-201ENST00000609937 1394 ntBASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.41■■□□□ 1.18
PTCH2Q9Y6C5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms