Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA9Q9Y5G4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHGA9Q9Y5G4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 AC004264.1-201ENST00000608354 794 ntBASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA9Q9Y5G4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 TMPOP1-202ENST00000424642 1267 ntBASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA9Q9Y5G4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 FAM197Y1-201ENST00000421178 764 ntBASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 KRT8P36-201ENST00000489121 1440 ntBASIC18.49■□□□□ 0.55
PCDHGA9Q9Y5G4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGA9Q9Y5G4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms