Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 AL158047.1-201ENST00000445918 881 ntBASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGB6Q9Y5F9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGB6Q9Y5F9 AC027702.1-201ENST00000563810 1770 ntBASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGB6Q9Y5F9 AC018445.3-201ENST00000624177 1945 ntBASIC18.64■□□□□ 0.58
PCDHGB6Q9Y5F9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB6Q9Y5F9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGB6Q9Y5F9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.64■□□□□ 0.58
PCDHGB6Q9Y5F9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 SOX15-203ENST00000570788 1093 ntBASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 RN7SL471P-201ENST00000580476 299 ntBASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AL359736.2-201ENST00000621992 437 ntBASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AC007225.1-201ENST00000566331 1836 ntBASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGB6Q9Y5F9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGB6Q9Y5F9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms