Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB13Q9Y5F0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 RPS2P52-201ENST00000469610 820 ntBASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 AP001271.2-201ENST00000624018 1556 ntBASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB13Q9Y5F0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 AC009237.14-201ENST00000609975 1594 ntBASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 AC008687.6-201ENST00000596318 630 ntBASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHB13Q9Y5F0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB13Q9Y5F0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB13Q9Y5F0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHB13Q9Y5F0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
PCDHB13Q9Y5F0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.83■■□□□ 1.08
PCDHB13Q9Y5F0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB13Q9Y5F0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB13Q9Y5F0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AC116351.2-201ENST00000606540 1585 ntBASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB13Q9Y5F0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB13Q9Y5F0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB13Q9Y5F0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB13Q9Y5F0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDHB13Q9Y5F0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PCDHB13Q9Y5F0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms