Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AC008550.1-201ENST00000511500 884 ntBASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHB3Q9Y5E6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 AL359736.2-201ENST00000621992 437 ntBASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHB3Q9Y5E6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHB3Q9Y5E6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHB3Q9Y5E6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 C1QBPP2-201ENST00000528754 825 ntBASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 SOX15-203ENST00000570788 1093 ntBASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDHB3Q9Y5E6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDHB3Q9Y5E6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms