Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF11Q9Y3C5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 KRT8P20-201ENST00000423953 1409 ntBASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF11Q9Y3C5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 AC026185.1-201ENST00000445748 174 ntBASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 RAP2CP1-201ENST00000605103 478 ntBASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF11Q9Y3C5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 MIR663A-201ENST00000385250 93 ntBASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 AC105036.2-201ENST00000569468 176 ntBASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF11Q9Y3C5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.27■□□□□ 0.67
RNF11Q9Y3C5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 LSM12P1-201ENST00000411836 588 ntBASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 CROCCP5-201ENST00000436658 830 ntBASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 AF201337.1-201ENST00000520239 748 ntBASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RNF11Q9Y3C5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms