Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC133561.5-201ENST00000635547 218 ntBASIC27.17■■□□□ 1.94
NINLQ9Y2I6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
NINLQ9Y2I6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 GOLGA6L3-201ENST00000507199 1679 ntBASIC27.16■■□□□ 1.94
NINLQ9Y2I6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
NINLQ9Y2I6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 AC097493.4-201ENST00000641197 219 ntBASIC27.15■■□□□ 1.94
NINLQ9Y2I6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
NINLQ9Y2I6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 AP001271.2-201ENST00000624018 1556 ntBASIC27.14■■□□□ 1.94
NINLQ9Y2I6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 AL355355.2-201ENST00000442321 338 ntBASIC27.14■■□□□ 1.94
NINLQ9Y2I6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
NINLQ9Y2I6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
NINLQ9Y2I6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC27.14■■□□□ 1.93
NINLQ9Y2I6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
NINLQ9Y2I6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 AC116562.2-201ENST00000507042 360 ntBASIC27.13■■□□□ 1.93
NINLQ9Y2I6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
NINLQ9Y2I6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 TUBB8P6-201ENST00000436895 1288 ntBASIC27.12■■□□□ 1.93
NINLQ9Y2I6 TSPY15P-201ENST00000457163 923 ntBASIC27.12■■□□□ 1.93
NINLQ9Y2I6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 AC012306.2-201ENST00000609350 630 ntBASIC27.12■■□□□ 1.93
NINLQ9Y2I6 REXO1L10P-201ENST00000615707 1290 ntBASIC27.12■■□□□ 1.93
NINLQ9Y2I6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
NINLQ9Y2I6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 AC087499.1-201ENST00000418141 1075 ntBASIC27.11■■□□□ 1.93
NINLQ9Y2I6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC27.11■■□□□ 1.93
NINLQ9Y2I6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 ARMC10P1-201ENST00000313754 855 ntBASIC27.1■■□□□ 1.93
NINLQ9Y2I6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 AC073314.1-201ENST00000568729 2216 ntBASIC27.1■■□□□ 1.93
NINLQ9Y2I6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC27.1■■□□□ 1.93
NINLQ9Y2I6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms