Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 CRYGFP-201ENST00000418459 633 ntBASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 ECEL1P2-202ENST00000465689 757 ntBASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 AC130371.2-201ENST00000619443 611 ntBASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 AC006011.2-201ENST00000621313 1158 ntBASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
CDK11AQ9UQ88 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
CDK11AQ9UQ88 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CDK11AQ9UQ88 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 AP000692.2-201ENST00000608391 879 ntBASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CDK11AQ9UQ88 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 AC006128.1-201ENST00000624704 1661 ntBASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CDK11AQ9UQ88 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 FAM87A-204ENST00000613235 858 ntBASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDK11AQ9UQ88 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 PHGDH-210ENST00000641115 1638 ntBASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.66■■■□□ 2.5
CDK11AQ9UQ88 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 WWOX-216ENST00000569818 525 ntBASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 AC087388.1-201ENST00000571370 1112 ntBASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDK11AQ9UQ88 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 RCC2P6-201ENST00000526625 1557 ntBASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDK11AQ9UQ88 AC007225.1-201ENST00000566331 1836 ntBASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 BX664615.1-201ENST00000443558 458 ntBASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 SLC25A1P4-201ENST00000567977 778 ntBASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDK11AQ9UQ88 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms