Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
ZC3H4Q9UPT8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.08■■□□□ 1.44
ZC3H4Q9UPT8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.44
ZC3H4Q9UPT8 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.08■■□□□ 1.44
ZC3H4Q9UPT8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 ATP5G2P1-201ENST00000433580 426 ntBASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 MFAP1P1-201ENST00000442257 1255 ntBASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 GPALPP1-207ENST00000611650 899 ntBASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ZC3H4Q9UPT8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 AP006587.1-201ENST00000534129 1502 ntBASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 AC246785.2-201ENST00000432512 513 ntBASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 FDX1P1-201ENST00000449115 551 ntBASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.06■■□□□ 1.44
ZC3H4Q9UPT8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 AC011484.1-201ENST00000377652 1995 ntBASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 AL359075.1-203ENST00000462729 1002 ntBASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 AC080038.3-201ENST00000623346 1952 ntBASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.05■■□□□ 1.44
ZC3H4Q9UPT8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 RCC2P6-201ENST00000526625 1557 ntBASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ZC3H4Q9UPT8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 VENTXP5-201ENST00000523979 775 ntBASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ZC3H4Q9UPT8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 PTBP1P-201ENST00000554374 1601 ntBASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 TSPY17P-201ENST00000450329 467 ntBASIC24.02■■□□□ 1.44
ZC3H4Q9UPT8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms