Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN1Q9UMX0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.27■■□□□ 1
UBQLN1Q9UMX0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 AL353807.1-201ENST00000427475 662 ntBASIC21.27■■□□□ 1
UBQLN1Q9UMX0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 YBX1P10-201ENST00000444752 975 ntBASIC21.27■■□□□ 1
UBQLN1Q9UMX0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN1Q9UMX0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBQLN1Q9UMX0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBQLN1Q9UMX0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
UBQLN1Q9UMX0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.27■□□□□ 0.99
UBQLN1Q9UMX0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AL049637.2-201ENST00000641778 930 ntBASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 AP001271.2-201ENST00000624018 1556 ntBASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
UBQLN1Q9UMX0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 MIR4497-201ENST00000583208 89 ntBASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 LINC01006-201ENST00000333319 2292 ntBASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.25■□□□□ 0.99
UBQLN1Q9UMX0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 SNORA78-201ENST00000459373 127 ntBASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
UBQLN1Q9UMX0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
UBQLN1Q9UMX0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms