Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 AC137761.2-201ENST00000561729 223 ntBASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 AC145350.3-201ENST00000569033 163 ntBASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.41■■□□□ 1.02
CAPN11Q9UMQ6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPN11Q9UMQ6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPN11Q9UMQ6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 MIR6821-201ENST00000617625 74 ntBASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPN11Q9UMQ6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 AC023632.3-201ENST00000521633 145 ntBASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPN11Q9UMQ6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 AL355472.2-201ENST00000422958 438 ntBASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 AC087623.3-201ENST00000607047 1098 ntBASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 AC093503.3-201ENST00000624917 2352 ntBASIC21.37■■□□□ 1.01
CAPN11Q9UMQ6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPN11Q9UMQ6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms