Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.6■□□□□ 0.89
PPARGC1AQ9UBK2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 AC006557.6-201ENST00000623071 864 ntBASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.59■□□□□ 0.89
PPARGC1AQ9UBK2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 AC026366.1-201ENST00000488803 879 ntBASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 AP003097.1-201ENST00000530657 1135 ntBASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 AC008403.3-201ENST00000598924 454 ntBASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PPARGC1AQ9UBK2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 KRT16P6-202ENST00000425692 1426 ntBASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 BX119927.1-201ENST00000636596 1552 ntBASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PPARGC1AQ9UBK2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 MIR4651-201ENST00000582622 73 ntBASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 AC008687.6-201ENST00000596318 630 ntBASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
PPARGC1AQ9UBK2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 AC120498.8-201ENST00000614275 531 ntBASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms