Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC007663.1-201ENST00000438948 1240 ntBASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AC008040.2-201ENST00000461049 708 ntBASIC21.12■□□□□ 0.97
CHD7Q9P2D1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD7Q9P2D1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 SLC25A1P2-201ENST00000430693 912 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 TSPY21P-201ENST00000433481 731 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 TSPY23P-201ENST00000440136 739 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 AC004980.1-204ENST00000429707 299 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 MFAP1P1-201ENST00000442257 1255 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 CCR12P-201ENST00000446203 998 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 AC023511.2-201ENST00000618803 211 ntBASIC21.11■□□□□ 0.97
CHD7Q9P2D1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD7Q9P2D1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 AC242852.2-201ENST00000615738 1807 ntBASIC21.1■□□□□ 0.97
CHD7Q9P2D1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 AC005229.4-201ENST00000610085 2198 ntBASIC21.1■□□□□ 0.97
CHD7Q9P2D1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 AC008622.2-201ENST00000617006 1229 ntBASIC21.1■□□□□ 0.97
CHD7Q9P2D1 AC004263.2-201ENST00000617183 678 ntBASIC21.1■□□□□ 0.97
CHD7Q9P2D1 KRT8P10-201ENST00000450021 1447 ntBASIC21.1■□□□□ 0.97
CHD7Q9P2D1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD7Q9P2D1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 AP000692.2-201ENST00000608391 879 ntBASIC21.09■□□□□ 0.97
CHD7Q9P2D1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD7Q9P2D1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD7Q9P2D1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.08■□□□□ 0.96
CHD7Q9P2D1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHD7Q9P2D1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms