Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
UBP1Q9NZI7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AL390719.1-204ENST00000412397 1219 ntBASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AC073210.2-201ENST00000430369 194 ntBASIC20.15■□□□□ 0.82
UBP1Q9NZI7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AC005829.2-201ENST00000571422 1056 ntBASIC20.15■□□□□ 0.82
UBP1Q9NZI7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AC092368.3-202ENST00000574180 1591 ntBASIC20.15■□□□□ 0.82
UBP1Q9NZI7 TMEM179-206ENST00000616017 1645 ntBASIC20.15■□□□□ 0.82
UBP1Q9NZI7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBP1Q9NZI7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.14■□□□□ 0.81
UBP1Q9NZI7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
UBP1Q9NZI7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 AC124283.5-201ENST00000624661 1809 ntBASIC20.13■□□□□ 0.81
UBP1Q9NZI7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
UBP1Q9NZI7 PHGDH-210ENST00000641115 1638 ntBASIC20.13■□□□□ 0.81
UBP1Q9NZI7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UBP1Q9NZI7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms