Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
BLOC1S4Q9NUP1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
BLOC1S4Q9NUP1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
BLOC1S4Q9NUP1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
BLOC1S4Q9NUP1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
BLOC1S4Q9NUP1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
BLOC1S4Q9NUP1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
BLOC1S4Q9NUP1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms