Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.58■□□□□ 0.08
SMCO4Q9NRQ5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMCO4Q9NRQ5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 AL592293.1-201ENST00000502889 1188 ntBASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 SIRPAP1-201ENST00000448467 1770 ntBASIC15.57■□□□□ 0.08
SMCO4Q9NRQ5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SMCO4Q9NRQ5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SMCO4Q9NRQ5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SMCO4Q9NRQ5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms