Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHD8Q9HCK8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 KRT18P31-201ENST00000506277 1292 ntBASIC18.54■□□□□ 0.56
CHD8Q9HCK8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 PTBP1P-201ENST00000554374 1601 ntBASIC18.54■□□□□ 0.56
CHD8Q9HCK8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 BX119927.1-201ENST00000636596 1552 ntBASIC18.54■□□□□ 0.56
CHD8Q9HCK8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 AL590627.1-203ENST00000421194 1026 ntBASIC18.54■□□□□ 0.56
CHD8Q9HCK8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHD8Q9HCK8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 TSPY19P-201ENST00000418461 509 ntBASIC18.53■□□□□ 0.56
CHD8Q9HCK8 TSPY18P-201ENST00000441642 509 ntBASIC18.53■□□□□ 0.56
CHD8Q9HCK8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 STARP1-201ENST00000397973 869 ntBASIC18.53■□□□□ 0.56
CHD8Q9HCK8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 SPDYE15P-201ENST00000424157 909 ntBASIC18.53■□□□□ 0.56
CHD8Q9HCK8 HTR5BP-201ENST00000430851 1154 ntBASIC18.53■□□□□ 0.56
CHD8Q9HCK8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHD8Q9HCK8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 KRT18P1-202ENST00000452408 1331 ntBASIC18.52■□□□□ 0.56
CHD8Q9HCK8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 PMS2P2-201ENST00000425039 1128 ntBASIC18.52■□□□□ 0.56
CHD8Q9HCK8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.52■□□□□ 0.56
CHD8Q9HCK8 AC140113.2-201ENST00000604370 208 ntBASIC18.52■□□□□ 0.56
CHD8Q9HCK8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHD8Q9HCK8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 IL9RP2-201ENST00000423948 1312 ntBASIC18.51■□□□□ 0.55
CHD8Q9HCK8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 AL645929.1-201ENST00000420084 975 ntBASIC18.51■□□□□ 0.55
CHD8Q9HCK8 AC004980.1-204ENST00000429707 299 ntBASIC18.51■□□□□ 0.55
CHD8Q9HCK8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHD8Q9HCK8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 HBZP1-201ENST00000354915 429 ntBASIC18.5■□□□□ 0.55
CHD8Q9HCK8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CHD8Q9HCK8 MIR564-202ENST00000385049 94 ntBASIC18.5■□□□□ 0.55
CHD8Q9HCK8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms